rs33059655 SNP Detail

Summary

• ID
  rs33059655
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:192102086 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGTAGAGGT TGGGCTGTGG
  TGAGCAGGGT AAGCAGGTAA GAGACGTGTT ATCTAGGCCC TTAATGAACA AAGATGTGGG
  TGGATGGAGA GAAACACATC ACTTTGAGAT ATATAAAAAG TCAAAGGAGT CCAATGACAG
  TTTGCTCTTG GGAGAGGTAG GATCTCTCAT TGGTTAACAG GGAGGCTAGT TCACCATATG
  Y
  AGCAAGAAGG AATGTGGGAG GAGCAGGGAC ATGTGTAACA TGACAGTATT TGAGAGCTTG
  ACCATCAGTG GCCCTGGGGA AACTTCTGAG GCAGCCACAG GATAGGTCTC CAATACACAC
  ACATCTCTCT AAGGGGACAA GACATCATGG CATAATCACT ATTTACAGAC ATTTGATTTT
  TGCCCAATAT CCTGCAGATG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	MOLF/EiJ	NOD/ShiLtJ	WSB/EiJ
ss46767123	NES10657010	PERLEGEN	MM_PANEL2	f	SNP	C	C	T	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	MOLF/EiJ	NOD/ShiLtJ	WSB/EiJ
rs33059655					SNP	C	C	T	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46767123	NES10657010	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:192102086 () rs orientation: forward

Symbol	Name	Function Class
D1Mit510	DNA Segment, Chr 1 Massachusetts Institute of Technology 510	1662 bp distal
Kcnh1	potassium voltage-gated channel, subfamily H (eag-related), member 1	within coordinates