rs33061272 SNP Detail

Summary

• ID
  rs33061272
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:83559988 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTGGCAAGC AACTAGGGAG
  TGTCCAGAAC TTCTGTATTA GAGGATCTTA CCGTGGCTGA AGCCACTACT GAGGCTCCTT
  TCTTATTCAG GCATCTGGCT TTCCTTGAAA ACATGGTAAT CTCTCTATAA ACAGCACGGA
  AGATCTGATG TTCTGTATTT TGCTTTTGGT CAATTAGCTG CTCTCTCTAT ACCACAGAAA
  Y
  GAGTTTAGCT GCAAATGTGA CGCTCGTTAG GAGGGCAGAT GTGGGGATGT GTGCACATGT
  AGAACATTGA CACTTTGCTC CCCAAATATA TTTATTCCCT CTTATTCACA AGGGTGTGTG
  TGTGTGTGAA ATAGCTGCTT TCTGGGTATA GATTATTTCT GCCATCTTAG TCTGTGCTTG
  ATACTGCGGT GAACAGTGTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss47751100	NES11297416	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	T	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs33061272					SNP	C	C	C	C	C	T	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47751100	NES11297416	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:83559988 () rs orientation: forward

Symbol	Name	Function Class
Gm36120	predicted gene, 36120	649 bp downstream