rs33062421 SNP Detail

Summary

• ID
  rs33062421
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:83561056 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAGGGATTT AGACGAAACA
  AGTTTGACTT TTCCATGAGC AGCAGTAACA ACGGGCAGCT ACTCCAGAGC CAAGCTATAG
  CTCGGCTAAG TCACAGCTAA AAGTTCTCAG GGCCTTTGGG GTGCCAATTG ATAGCTGTCC
  TTTGCAGAGC AAATTTGCAG GGCCAGACAG GAGCAGTAGG AGCAGGTTTC CTGGCTCTTG
  M
  AGGTATTGAA GCATAGAGTC GCAGGGCTCT GGGGGTGGAG GCAGAAACGA ATTACCCTGG
  AAGCAGTAGC TGGCTAGTGG AGAAGGAGCA AGCTCCCAGC AGGCAGAAAA CTGCAGGAAC
  GCAGAGCTGA GTCCTTCTGA GGACCTGCTT GGCTATGACA GTCTTTGCAG GCTGTAGAGA
  ACTGCTTTTT ATTGTTGTAC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss47751110	NES11297369	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	A	C	C	A	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs33062421					SNP	C	C	C	A	C	C	A	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47751110	NES11297369	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:83561056 () rs orientation: forward

Symbol	Name	Function Class
Gm36120	predicted gene, 36120	within coordinates