rs33064445 SNP Detail

Summary

• ID
  rs33064445
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:3766703 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGATACAGT CCTCATGTCC
  TCTGGAATCA TTGGGCTCTC CAGAGTTCCA GTGGCTGTGG TAGTTCAGTG GGAGTGTTAC
  TGGGACTGAG GATAGACCTA GGGTCAAGCT TCCTTTCCCA GGCCTTGCTT GTTTGCTTGG
  CTCTGCTCTA GACATTCTGA ATGCCTACAT TGAGTTTATA TCTGCAGTGT ATATTTGTAC
  R
  GACCCAGAAT TTAACCCTTA GTTAATTCCC AGGGTCTAGC ATATCCATTC TTTAAATGTT
  ATTTCAGGGG CTGAGGATAT TTCTCAGTGG AAAAGAATGC TTGTTATAAT GCTTTGTTGT
  ACAAAGACCT GAGTTCAAAT CCCAAGTAGT CACATAAAAA GCTCTGTATG GTTGTGCAAG
  TGTTTATAAC CCAAGCAGGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss46229557	mCV22849347	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss148548709	ENSMUSSNP573563	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs33064445					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:3766703 () rs orientation: forward

Symbol	Name	Function Class
Clec4g	C-type lectin domain family 4, member g	within coordinates
Cpgi20034	CpG island 20034	1922 bp proximal
Gm16553	predicted gene 16553	within coordinates
Rr400747	regulatory region 400747	1866 bp upstream
Rr658970	regulatory region 658970	1896 bp proximal
Tssr80223	transcription start site region 80223	844 bp downstream
Tssr80224	transcription start site region 80224	859 bp downstream