rs33065531 SNP Detail

Summary

• ID
  rs33065531
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:154523176 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGAGTCAGTG CCGTGGGATT
  GTCACTCGAA GAAGGACAGA GGGTCAGGTC TGTTCACGCT TGCATTATGA CGTGGCAGAT
  ATGACGCTGT CCCTGAGCAG CAGGGACTTC CCGCCGTGCC ACAAGCCGAT GTGACATGGG
  GTGCAGACCA CGATGTAATG CCATACACAG CTGTATTGCA AGTCATTACA CCAGTGATAC
  M
  CAAAATGTCT CTCCTGGAAA TCAAGCTGGC TTCCTCTCAG CCCAGCTTGT TTCCCTCACT
  CCTCCACCTC CCTTGCAGCT GTTCGCACTA GCCCACACAC GACGCTCAGG CTGCCTGGCA
  TTCGCTTGGG CCCCTGCCTT TGCCACTGTG AGCATCCTCC CCAGATAACC GTGAATGCTG
  AATTTCCCTG GACGCCCCGG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss46767341	NES10929608	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	A	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs33065531					SNP	C	C	C	C	C	C	C	C	A	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46767341	NES10929608	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:154523176 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15440	CpG island 15440	within coordinates
Prdm16	PR domain containing 16	within coordinates