rs33065764 SNP Detail

Summary

• ID
  rs33065764
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:172891713 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGGGTGCTGT CACCAGGGGA CACCTGCAAA TAAACAAACA
  AACAAAAAAA GGACTGTTTT CTTTCCTCTG CTTGGCGGCA AAGGCAAGCT ATGCTTTTAG
  K
  GACATGCCCC AGCTTGCAGC TGGGGTCCCT GGGGATCTGC CTTCAGTGGT GGGTTCAGAA
  CGGCTGAGCC CAGTCACCAA CCCAGGCAGC TCTCTATGC                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45233285	mCV22952854	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	T	G
ss148328538	ENSMUSSNP5042849	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33065764					SNP	T	T	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:172891713 () rs orientation: forward

Symbol	Name	Function Class
Gm36337	predicted gene, 36337	within coordinates
Gm74627	predicted gene, 74627	within coordinates
Gm74628	predicted gene, 74628	50 bp downstream
Rr571824	regulatory region 571824	934 bp distal
Rr571825	regulatory region 571825	within coordinates
Rr571826	regulatory region 571826	195 bp proximal
Rr571827	regulatory region 571827	628 bp proximal
Rr571828	regulatory region 571828	1003 bp proximal
Rr571829	regulatory region 571829	1272 bp proximal