rs33066757 SNP Detail

Summary

• ID
  rs33066757
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:192100658 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCAGGCCAA GCACCCCTCC
  TCACCCTTCC CTTTGACTCT TGTGTTGCCA CCCAGAGTCA AAGCCTCTAA TCCCACTCTG
  GGTTTTCAGC TGACATTTGC TCCTTGATCT GTGCCACTGG TCACAGTTTC ACTTGGAAAC
  TTCTCACATG CTTGGTATTT TCTCTGTATG ATGCCTCCTA GGCCTCCTCT GACCTGGGTG
  R
  ACTACTGCCA CAGAGCCTTT GTGTATGCTA TCCTCCTGGA ATGTTCTACT CCCACAAGGT
  TCACTCTGAC ATACTCTAAA GCTGTCAGCT GAAATAGCAT CTCCTCAGAG ACCTTTCCCA
  TGCCCGATTC CCTCCTAGCC CTGACTTTCA GATCTGCATC CTGAGCATTC CATTCTGCAG
  AACGTTCTAG AATCCAGACA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	WSB/EiJ
ss46767111	NES10657006	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	G	A	A	G	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	WSB/EiJ
rs33066757					SNP	A	A	A	A	G	A	A	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46767111	NES10657006	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:192100658 () rs orientation: forward

Symbol	Name	Function Class
D1Mit510	DNA Segment, Chr 1 Massachusetts Institute of Technology 510	234 bp distal
Kcnh1	potassium voltage-gated channel, subfamily H (eag-related), member 1	within coordinates
Rr426339	regulatory region 426339	1604 bp distal