rs33066760 SNP Detail

Summary

• ID
  rs33066760
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:192100679 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACCCTTCCC TTTGACTCTT
  GTGTTGCCAC CCAGAGTCAA AGCCTCTAAT CCCACTCTGG GTTTTCAGCT GACATTTGCT
  CCTTGATCTG TGCCACTGGT CACAGTTTCA CTTGGAAACT TCTCACATGC TTGGTATTTT
  CTCTGTATGA TGCCTCCTAG GCCTCCTCTG ACCTGGGTGA ACTACTGCCA CAGAGCCTTT
  R
  TGTATGCTAT CCTCCTGGAA TGTTCTACTC CCACAAGGTT CACTCTGACA TACTCTAAAG
  CTGTCAGCTG AAATAGCATC TCCTCAGAGA CCTTTCCCAT GCCCGATTCC CTCCTAGCCC
  TGACTTTCAG ATCTGCATCC TGAGCATTCC ATTCTGCAGA ACGTTCTAGA ATCCAGACAC
  TGCTTGGCTT GCCCAGGGAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	MOLF/EiJ	NOD/ShiLtJ	WSB/EiJ
ss46767114	NES10657007	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	A	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	MOLF/EiJ	NOD/ShiLtJ	WSB/EiJ
rs33066760					SNP	G	G	G	A	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46767114	NES10657007	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:192100679 () rs orientation: forward

Symbol	Name	Function Class
D1Mit510	DNA Segment, Chr 1 Massachusetts Institute of Technology 510	255 bp distal
Kcnh1	potassium voltage-gated channel, subfamily H (eag-related), member 1	within coordinates
Rr426339	regulatory region 426339	1625 bp distal