rs33068473 SNP Detail

Summary

• ID
  rs33068473
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:70686569 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGCT CAGGTGCACA CAGGCGCAGC
  R
  CGAATGAATA AAATGAATGA AAGAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46230707	mCV27580498	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G	A
ss145122497	ENSMUSSNP4791339	ENSEMBL	ENSEMBL_Sanger	f	SNP			G		A
ss322699303	CHEV_8_72757818	CHEVERUD	SCREENING_POP	f	SNP						A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33068473					SNP	A	A	G	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:70686569 () rs orientation: forward

Symbol	Name	Function Class
Armc6	armadillo repeat containing 6	within coordinates
Cpgi20446	CpG island 20446	within coordinates
Rr400897	regulatory region 400897	435 bp upstream
Sugp2	SURP and G patch domain containing 2	269 bp upstream
Tssr77717	transcription start site region 77717	268 bp upstream
Tssr77718	transcription start site region 77718	613 bp upstream
Tssr77719	transcription start site region 77719	694 bp upstream
Tssr77720	transcription start site region 77720	722 bp upstream
Tssr81601	transcription start site region 81601	178 bp downstream
Tssr81602	transcription start site region 81602	482 bp downstream