rs33069751 SNP Detail

Summary

• ID
  rs33069751
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:154521295 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACACTCGCAC ATATACACAC
  ATACACACAC ACACATACAC ACAAATATAA TTTCTTTTAA AAACATTTTT TAAACATATA
  CTATAGTAGG GAAATTTAAG AAGCTGTGAT TCTGACAGAT CCTGGTGGAA TCAGATACAA
  GGTAACAGAT CTCACTGTGT AAACAACAAA CTATGGTCAA CTGAGATCAG TGTGGTGAGG
  R
  CAAGAGTTCC CTGTGGACCA ACATCTCACC TAAAGGGCCC ATCAGTCAGT GTGTGCTGCC
  TGTCTCAGTA AGATTCTGTT CAAATGCAAC TTAGCTAAAA TTAATAGAGA GGAGATCTCA
  GATGCCTCTG CAGTCCTGGC TGCATTCCCC AGGGCTTAGC AGCAACAAGC TGCCCGTGAC
  TTCTGAAGTG GGCAGTGCTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46767293	NES10929620	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	G	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33069751					SNP	A	A	A	A	A	A	G	A	A	G	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46767293	NES10929620	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:154521295 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15440	CpG island 15440	1557 bp proximal
Prdm16	PR domain containing 16	within coordinates