rs33070149 SNP Detail

Summary

• ID
  rs33070149
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:72171659 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTTA GGGTATTTCT GCCTCCCCCA
  R
  CCCCCTCCGC CCCAGCTTCC CTACA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46230990	mCV22796554	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	G
ss145153746	ENSMUSSNP4693173	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		G
ss322705582	CHEV_8_74242914	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33070149					SNP	G	A	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:72171659 () rs orientation: forward

Symbol	Name	Function Class
Fcho1	FCH domain only 1	within coordinates
Rr177589	regulatory region 177589	1342 bp proximal
Rr186857	regulatory region 186857	941 bp proximal
Tssr81753	transcription start site region 81753	1798 bp upstream
Tssr81754	transcription start site region 81754	212 bp downstream