rs33070720 SNP Detail

Summary

• ID
  rs33070720
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:154521557 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCTCAGTAA GATTCTGTTC
  AAATGCAACT TAGCTAAAAT TAATAGAGAG GAGATCTCAG ATGCCTCTGC AGTCCTGGCT
  GCATTCCCCA GGGCTTAGCA GCAACAAGCT GCCCGTGACT TCTGAAGTGG GCAGTGCTGT
  TCTAATGGGC TGCCCCCGTA TGGTTGATTC TGCCGTGGAT CCTTGCCTGG ACTGAGTCCT
  R
  GATGCTCAGG GCCTGGTGAG CAGGATGGGG AAGGAGATGG GTGGGAACAT GATTTAGATG
  CAGTAAACAT TTCTCATGTC CTTTAGGGTC TAAGCAAGCG CTGCTAGGGA CTATGTTGAA
  AGCTGGGTTG CTATCTGATG GTCCTGAGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG
  TGTGTGTGTG TGTGATTGTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	NZW/LacJ	WSB/EiJ
ss46767302	NES10929623	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	A	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	NZW/LacJ	WSB/EiJ
rs33070720					SNP	G	G	G	G	G	G	G	G	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46767302	NES10929623	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:154521557 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15440	CpG island 15440	1295 bp proximal
Prdm16	PR domain containing 16	within coordinates