rs33074570 SNP Detail

Summary

• ID
  rs33074570
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:26751664 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAATA CTGAAGCTGG CTGGGGCAGC
  R
  CACACCAGGA ACCTAGCAAC TGGGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	LG/J	SM/J
ss39491437	mCV22900259	ABI	CRAMUS_MOUSE	f	SNP	G	A
ss145405329	ENSMUSSNP6968677	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss325342259	CHEV_17_26669635	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	LG/J	SM/J
rs33074570					SNP	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:26751664 () rs orientation: forward

Symbol	Name	Function Class
Gm34606	predicted gene, 34606	within coordinates
Tssr143239	transcription start site region 143239	851 bp downstream
Tssr143240	transcription start site region 143240	189 bp upstream
Tssr143241	transcription start site region 143241	205 bp upstream
Tssr143242	transcription start site region 143242	219 bp upstream
Tssr143243	transcription start site region 143243	244 bp upstream
Tssr143244	transcription start site region 143244	275 bp upstream
Tssr143245	transcription start site region 143245	1435 bp upstream
Tssr146959	transcription start site region 146959	993 bp upstream
Tssr146960	transcription start site region 146960	73 bp upstream
Tssr146961	transcription start site region 146961	43 bp upstream
Tssr146962	transcription start site region 146962	14 bp upstream
Tssr146963	transcription start site region 146963	20 bp downstream