rs33074825 SNP Detail

Summary

• ID
  rs33074825
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:34614776 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGTACAAAAT CAGACCGATT TAAGTTTCTC CTTGTAAAGG
  TAGCCGGAAC TTCCTTTCCT GTGTTACATG AGAAGATATT TGCAACACAA AATTTCCCAT
  K
  TGTAAATATT TTCATTTCTG AGGAAGAGAC AGATGTCTCT GTAAGCAGCC GCAATTGGAG
  TTTGTAGAAA TGTTACAGAA ATAGCCTTTA TCTCCCTTA                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46231043	mCV24537502	ABI	CRAMUS_MOUSE	f	SNP	T	T	G	T
ss149094967	ENSMUSSNP4838664	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		T
ss322575463	CHEV_8_35210676	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33074825					SNP	T	T	G	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:34614776 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20243	CpG island 20243	427 bp distal
Leprotl1	leptin receptor overlapping transcript-like 1	883 bp upstream
Rr661963	regulatory region 661963	600 bp distal
Rr661964	regulatory region 661964	99 bp distal
Rr661965	regulatory region 661965	1510 bp proximal
Tssr76862	transcription start site region 76862	1285 bp downstream
Tssr76863	transcription start site region 76863	1255 bp downstream
Tssr76864	transcription start site region 76864	1238 bp downstream
Tssr80896	transcription start site region 80896	1461 bp upstream
Tssr80897	transcription start site region 80897	1035 bp upstream
Tssr80898	transcription start site region 80898	904 bp upstream
Tssr80899	transcription start site region 80899	870 bp upstream
Tssr80900	transcription start site region 80900	854 bp upstream
Tssr80901	transcription start site region 80901	812 bp upstream
Tssr80902	transcription start site region 80902	609 bp upstream
Tssr80903	transcription start site region 80903	556 bp upstream