rs33075282 SNP Detail

Summary

• ID
  rs33075282
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:94605108 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGCTAGCTCA GGGCTTCCTC TCAACACGTC ATTGGATATC
  CATCCTCTGC ACCAGATGCT CAGAGCTGAC TGCTGAGGGT ACAGAGCTAA CAGTGGCCTC
  R
  GAGGGGCCCC AGGAGATGGG AGTGCCTTCA AGAGGGACAA GGGAATGTCA ATGCTCTCTG
  ACTGAAGACT TACTGGTGGT TTCTCTGCCT CTCTCTTGCT                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46768666	NES10722460	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33075282					SNP	G	G	G	G	G	G	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46768666	NES10722460	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:94605108 () rs orientation: forward

Symbol	Name	Function Class
Gm66811	predicted gene, 66811	within coordinates
Rr580694	regulatory region 580694	1202 bp distal
Selenbp2	selenium binding protein 2	within coordinates
Tssr30465	transcription start site region 30465	1789 bp upstream