rs33075945 SNP Detail

Summary

• ID
  rs33075945
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:66370777 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCTGGAATTC ACTCTGTAGA CCAGGCTGGC CTCAAACTCA
  GAAATCCACC TGCCTCTGCC TCCCAAGTAC TGGGATTAAA AGTGTGTGCC ACCACTGCCC
  R
  GCTTTTTTTT TTTTTTTTTG GTTTTTTGAG ACAGGGTTTC TCTGTATCAC CCTGGCTGTC
  CTGGAACTCA CTTTGTAGAC CAGGCTGGCC TCAAACTCA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45734125	mCV22883477	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A
ss148586906	ENSMUSSNP3072968	ENSEMBL	ENSEMBL_Sanger	f	SNP		A		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs33075945					SNP	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:66370777 () rs orientation: forward

Symbol	Name	Function Class
Gm3822	predicted gene 3822	1313 bp upstream
Gm73278	predicted gene, 73278	1192 bp upstream
Gm73415	predicted gene, 73415	774 bp downstream
Rr378070	regulatory region 378070	429 bp upstream
Tssr51198	transcription start site region 51198	1110 bp downstream