rs33077582 SNP Detail

Summary

• ID
  rs33077582
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:23293698 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GATGGCATGG CAGCTTATGC CTATAATCCC AGCACCTAGA
  AGGCTGAGGC AGGAGGATGG CTGCAAATAT GCTGGGCTAC GCAGCTCAGG CTAGCCTGGG
  M
  TACACAATGC CAGCCCACCA AAGGTTTGGT TCTTTTATGG CTTATATACA TTTCTATACA
  CTCTCACATT TACAAACCTG AAATGTATCC ACTACTCGG                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss46232107	mCV24527098	ABI	CRAMUS_MOUSE	f	SNP	C	A
ss148843710	ENSMUSSNP6825175	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs33077582					SNP	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:23293698 () rs orientation: forward

Symbol	Name	Function Class
1700041G16Rik	RIKEN cDNA 1700041G16 gene	1929 bp upstream
Ap3m2	adaptor-related protein complex 3, mu 2 subunit	within coordinates
Cpgi20156	CpG island 20156	1625 bp proximal
D8Dcr5	DNA Segment, Chr 8, Derry C. Roopenian 5	1568 bp distal
Rr381798	regulatory region 381798	within coordinates
Rr400791	regulatory region 400791	1884 bp upstream
Tssr80611	transcription start site region 80611	201 bp downstream
Tssr80612	transcription start site region 80612	1914 bp downstream