rs33077866 SNP Detail

Summary

• ID
  rs33077866
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:122270549 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTAG CCACATTGGA AGCAACAATA
  S
  AGTTAGGAGG GGTGGTTGAC CCAGA                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45234587	mCV22597797	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	G	C
ss147419447	ENSMUSSNP1190502	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C		C
ss320488790	CHEV_2_122265804	CHEVERUD	SCREENING_POP	f	SNP						G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33077866					SNP	C	C	C	G	C	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:122270549 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr563981	regulatory region 563981			533 bp proximal
Slc28a2	solute carrier family 28 (sodium-coupled nucleoside transporter), member 2			Intron
				mRNA-UTR
				Noncoding-Transcript-Variant