rs33081114 SNP Detail

Summary

• ID
  rs33081114
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:93643257 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TAGGCATTAT GTGTGTATAT GAGCGTATGT ATATGTGTGT
  ATGTGTGCAT GCATGCCTTT GTGCATGTGC ATGCATGCAC AAACACACAC ACGCACACAC
  R
  CACACACCTT GAAATTATTT GGAAAGATAT TCACAACGCA TTATGAGAAA TGAAGCGTCT
  ATACATTATG ATCACATATT GCCATTCCTG GCCACCAAA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45234624	mCV23861654	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs33081114					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:93643257 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Cpgi11950	CpG island 11950			558 bp proximal
Ext2	exostosin glycosyltransferase 2			Intron
				Noncoding-Transcript-Variant
Rr561284	regulatory region 561284			833 bp distal
Rr561285	regulatory region 561285			465 bp proximal
Rr561286	regulatory region 561286			635 bp proximal