rs33082343 SNP Detail

Summary

• ID
  rs33082343
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:11989997 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAATGTCTAT TATAAATAAG GCTGCTATGA ACATAGTGGA
  GCATGTGTCC TTCTTACCGG TTGGAACATC TTCTGGATAT ATGCCCAGGA AAGGTATTGC
  K
  GGATCCTCCG GTAGTACTAT GTCCAATTTT CTGAGGAACC GCCAGACTGA TTTCCAGAGT
  GGTTGTACAA GCTTGCAATC CCACCAACAA TGGAGGAGT                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39491695	mCV22929937	ABI	CRAMUS_MOUSE	f	SNP	G	T	G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33082343					SNP	G	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:11989997 () rs orientation: forward

Symbol	Name	Function Class
Prkn	parkin RBR E3 ubiquitin protein ligase	within coordinates
Rr334164	regulatory region 334164	1797 bp distal
Rr343776	regulatory region 343776	1131 bp distal