rs33082361 SNP Detail

Summary

• ID
  rs33082361
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:71451521 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATGCTAAGC CACCAACCTA
  AAGGGAGGGA TCAAAGAAGA GATAGAGGAT TTAGTTCTCA TTATTAAGAA GGAGGAAAGG
  GTTTGGCATA AGGATCTTAG AGAGCTGAAG ACATAGCAGG ATTTCTAGGA AGTGCAGGGC
  TCACGTGACG CTCGGTGGCC TGTGTGTGAG AGGAGGCTCC TCGGCACAGC TGGGCAGGGC
  Y
  GTGCAGCTGT TATGACGATG AAGATGGAAT CTGGCAGGTG AGTACGCAGA GGAAGAATGG
  GGAAACGGAA CGGGGGAGAA CTACAGAGAA ATGATTATAG TGCTGGACCT CATTGTGAGT
  CAGCTTAGGA GTGTCATTGC CATTGCTACC AGATGCCCGA CAAAAGCCAC CTAAGGAGGG
  AGTGTCCAGT CTGCCTTACA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39491894	mCV22280565	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	T
ss145891628	ENSMUSSNP5729492	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		T
ss325441841	CHEV_17_71493866	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33082361					SNP	C	T	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:71451521 () rs orientation: forward

Symbol	Name	Function Class
1600022D10Rik	RIKEN cDNA 1600022D10 gene	within coordinates
Rr530422	regulatory region 530422	701 bp proximal