rs33083367 SNP Detail

Summary

• ID
  rs33083367
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:54437314 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAAAAGTGAT ATTTTGACTT CCTCTTTTCC AATTTGTTTC
  CCCTTGATCT CCTTTTGTTG TCGAATTGCT CTGGCTAATA CTTCAAGATG TAGCTGTCTC
  Y
  TGTGAGACTA TGCCGGGGCC TAGCAAACAC AGAAGTGGAT GCTCACAGTC AGCTAATGGA
  TGGATCACAG GGCTCACGAT GGAGGAGCTA TAGAAAGTA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss39492155	mCV24493858	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T
ss145029473	ENSMUSSNP7106537	ENSEMBL	ENSEMBL_Sanger	r	SNP		G
ss145777986	ENSMUSSNP5945432	ENSEMBL	ENSEMBL_Sanger	f	SNP			C
ss325420993	CHEV_17_54269612	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs33083367					SNP	C	C	C	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:54437314 () rs orientation: forward

Symbol	Name	Function Class
Rr392758	regulatory region 392758	1873 bp upstream