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rs33086022 SNP Detail
Summary
  • ID
    rs33086022
  • Variation Type
    SNP
  • Alleles
    C/T
Genome Location and Flanking Sequence
  • Location
    Chr17:3621036 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                CAAATAAAAG CATCTAAAAT
    ACCTAGATTA TGTTCATTTA CTGTGGTCCC CCACCTCTTA AAACCTGGAA TACTGTTGGA
    GGTGGGGTGG GAATAAAACC TTTAAAATGG AATTAGCCTA ATAGGAAAAT TAACAATAAA
    CTATAAGCGA AGCATGAAAG AAGGTTAGTT GTAATTCTGT TTAATCATCT TCATGGACAT
    Y
    AAGAAGTCAT TTTCCTTTTC TGTACCTCAG TTTCCATCTC CCGAGGGCAC GTGAATCCTG
    AAGGTCACCT CCAGCTTGGA GCAGCTGTTG TCAAAAACGT AGGTGTCATG AATATTGGTC
    TTAGTGTGGC ATCTTGGGCC CGATTACAAA GGCAAGTGTA GTTTACTTTC TGTAGTTTAC
    TTTTCTGCAA AGTGCCGGGA                                            
    
    Y = C/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129X1/SvJ
C57BL/6J
DBA/2J
ss39492194 mCV22963879 ABI CRAMUS_MOUSE f SNP T C C
ss145044561 ENSMUSSNP5226577 ENSEMBL ENSEMBL_Sanger f SNP T C
SNP Consensus Information
SNP Consensus Type
129X1/SvJ
C57BL/6J
DBA/2J
rs33086022 SNP T C C
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr17:3621036 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Gm34155 predicted gene, 34155 within coordinates
Gm65020 predicted gene, 65020 within coordinates
Rr331141 regulatory region 331141 165 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory