rs33086022 SNP Detail

Summary

• ID
  rs33086022
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:3621036 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAATAAAAG CATCTAAAAT
  ACCTAGATTA TGTTCATTTA CTGTGGTCCC CCACCTCTTA AAACCTGGAA TACTGTTGGA
  GGTGGGGTGG GAATAAAACC TTTAAAATGG AATTAGCCTA ATAGGAAAAT TAACAATAAA
  CTATAAGCGA AGCATGAAAG AAGGTTAGTT GTAATTCTGT TTAATCATCT TCATGGACAT
  Y
  AAGAAGTCAT TTTCCTTTTC TGTACCTCAG TTTCCATCTC CCGAGGGCAC GTGAATCCTG
  AAGGTCACCT CCAGCTTGGA GCAGCTGTTG TCAAAAACGT AGGTGTCATG AATATTGGTC
  TTAGTGTGGC ATCTTGGGCC CGATTACAAA GGCAAGTGTA GTTTACTTTC TGTAGTTTAC
  TTTTCTGCAA AGTGCCGGGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	C57BL/6J	DBA/2J
ss39492194	mCV22963879	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
ss145044561	ENSMUSSNP5226577	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	C57BL/6J	DBA/2J
rs33086022					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:3621036 () rs orientation: forward

Symbol	Name	Function Class
Gm34155	predicted gene, 34155	within coordinates
Gm65020	predicted gene, 65020	within coordinates
Rr331141	regulatory region 331141	165 bp proximal