rs33092534 SNP Detail

Summary

• ID
  rs33092534
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:27935588 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGCC TCTGCCTCCC CAGCGCTGAC
  M
  TTAAAGCCAC TATGCCCTGC TTGAA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39493242	mCV23074519	ABI	CRAMUS_MOUSE	f	SNP	A	A	C	A
ss145418916	ENSMUSSNP3023574	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		A
ss325349176	CHEV_17_27853559	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33092534					SNP	A	A	C	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:27935588 () rs orientation: forward

Symbol	Name	Function Class
Cpgi8855	CpG island 8855	399 bp proximal
Spdef	SAM pointed domain containing ets transcription factor	within coordinates