rs33095414 SNP Detail

Summary

• ID
  rs33095414
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:96086251 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCACCTTTCC TGCTGTTAAA
  TGTACCTGTA TTCTAATGAC TTTATTTGAT TGAAGAGCTA TAGTAGCTAC AGAATTATGT
  CATTTGTACA CTGGCCTAGT GGGAGATGCA TTCCCTAAAG GTGCTTGCAG ATAAGCTGGG
  AGGAAAGACT TCTTTCTGGT TTGTAAGGTT TATTCATATT GCTTGCTTTA CATCTCTCCA
  R
  CTGAGTGCAA TAGATGCCAA TGAAGTAAGG AGCCAGGTTG GACACACACA CATGTAGTTA
  TTTGACTTGA AGTTAGTGCT GTGTATATAA CAGGCCTGAG GCGTTTCACA TGGAATGACA
  CCTTGCCTGC AGACAGTAGG TAGTGAAAGA AAAAGTAACG TCAAGTGAAA AGTCTTTCAG
  GTATTTGGAT GTTCCGTGGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49442643	NES12830842	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33095414					SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49442643	NES12830842	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:96086251 () rs orientation: forward

Symbol	Name	Function Class
Gm69977	predicted gene, 69977	within coordinates
Rr371742	regulatory region 371742	1274 bp downstream
Rr371743	regulatory region 371743	1997 bp upstream