rs33096202 SNP Detail

Summary

• ID
  rs33096202
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:126219192 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TATACATATA TATGTACACA CATACACACA GGCACACATA
  TATATGGCCA GTCAAGCCTT GAATTTTTGA GAAAGGAACC ACAAGAGTTA AAAAAAAAAA
  W
  AGTGAGTTTC TCAATTCTCT GCAAGAGGCT GGGAATCCTT TCAGCTACGG AAATCTGAGA
  AGTTTCTGGA AGGCCCTGAA GGGAAAGATT CTGTCAGTGA                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47255801	NES11555337	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	T	A	A	T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33096202					SNP	A	A	A	A	A	A	A	A	A	A	T	A	A	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47255801	NES11555337	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:126219192 () rs orientation: forward

Symbol	Name	Function Class
Gm39086	predicted gene, 39086	1539 bp upstream
Gm39087	predicted gene, 39087	1679 bp upstream
Rr655535	regulatory region 655535	161 bp distal
Rr655536	regulatory region 655536	1440 bp proximal
Rr655537	regulatory region 655537	1873 bp proximal