rs33096513 SNP Detail

Summary

• ID
  rs33096513
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:32353051 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGTTTGGAC ACATATCCTT
  GTGCTCCCAG GAGGCTGAAT CTCTTAAGGG GAGCACAGCT CAGCATTGTT ATCTCCTCTG
  CTGTTTCTTG AATATAAAAG CATACAGGAT ACAGGTTACT AGCTGAGAAA TAGGTGATGA
  CTTGCTTATA CTAGAGGGAG CACTGGATAA GGAAAGCAAA TACTAAAATA ATTTGCAGAA
  M
  GGCAGGGAGT CTTTCTTCTC ATGCCCTTGC CCAAGTCAGG GTTTTATTTC ATGATATTTA
  TATGTGCATT GTTGGGGAGG GTACGTTGCT TGCTTACACA TGCTGAATGA TCATATTTTA
  GGGCTAGAGA TTTAGCCTGC CATTCCGAAT AATGTCACTT CTTATTATGC TTGTCCTTTT
  GTCTGTCCAT CTGGTGGAAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	WSB/EiJ
ss49442672	NES12613796	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	A	C
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	WSB/EiJ
rs33096513					SNP	C	C	C	C	C	C	C	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49442672	NES12613796	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:32353051 () rs orientation: forward

Symbol	Name	Function Class
Rr313079	regulatory region 313079	151 bp proximal
Sema5a	sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A	within coordinates