rs33096690 SNP Detail

Summary

• ID
  rs33096690
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:126267361 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATAAAAGTGA CCCACAGCTG
  GTCAGTGGTG GCGTACACCT TTAATCCCAG CACTTGGGAG GCAGAGGCAG GCGGATTTCT
  GAGTTCGAGG CCAGCCTGGT CTACAGAGTG AGTTCTAGGA CAGCCAGGAC TACACAGAGA
  AACCCAGTCT AAAAAAAAGA AAAAAGAAAA AAAAAAAAAA GTGACCCACA GTGGAGTTAG
  K
  TGTTCCTGCT GATTAACACT GAAGCCTTCT CCGTGAGATT TCACAAGACC TGGGATAAGG
  CAGTTTCTGG AGAAGCTGTA TGCTATCTTC TGCCAGCTTG GAGGCCAGGC AGCCGGATCA
  CACACAGGAG TGGGAATGGC TTCAGTCTTA GAGGAATGAG TCCCTGCAGC CTGGGGCCCA
  CACTGAGCTG GGCTCGTCTC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss47256170	NES11552338	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	G	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs33096690					SNP	T	T	T	T	T	T	G	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47256170	NES11552338	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:126267361 () rs orientation: forward

Symbol	Name	Function Class
D930031A20Rik	RIKEN cDNA D930031A20 gene	within coordinates
Rr381448	regulatory region 381448	within coordinates
Sgf29	SAGA complex associated factor 29	within coordinates