rs33097340 SNP Detail

Summary

• ID
  rs33097340
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:69151108 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGCC TCTGGTGAAC GATGTAATCT
  Y
  TGTGATCCCC TTCAGCTCTA AGAGC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39493770	mCV24540692	ABI	CRAMUS_MOUSE	f	SNP	T		T	C
ss145871978	ENSMUSSNP2404433	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		C
ss325436142	CHEV_17_69193453	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33097340					SNP	T	T	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:69151108 () rs orientation: forward

Symbol	Name	Function Class
Cpgi9445	CpG island 9445	1867 bp distal
Gm49949	predicted gene, 49949	within coordinates
Tmem200c	transmembrane protein 200C	975 bp downstream