rs33100736 SNP Detail

Summary

• ID
  rs33100736
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:71451679 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTGTGTGTG AGAGGAGGCT
  CCTCGGCACA GCTGGGCAGG GCTGTGCAGC TGTTATGACG ATGAAGATGG AATCTGGCAG
  GTGAGTACGC AGAGGAAGAA TGGGGAAACG GAACGGGGGA GAACTACAGA GAAATGATTA
  TAGTGCTGGA CCTCATTGTG AGTCAGCTTA GGAGTGTCAT TGCCATTGCT ACCAGATGCC
  Y
  GACAAAAGCC ACCTAAGGAG GGAGTGTCCA GTCTGCCTTA CAGTACCGGG GGAGACAGTC
  CATCCTGCAG GAGAAGGACG GGGCTCACCA CTGCATCCAG TCAGGAAGCA GAGGCAGAAA
  GCCTATGTTT AGCCCACTTG TCCTGTATTC AGTTCAGGAC TCTATCATAG AGTATGGTAG
  CTCATCCCAC ATTTACAGTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39493807	mCV22280566	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss145891631	ENSMUSSNP6092131	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		C
ss325441842	CHEV_17_71494024	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33100736					SNP	T	C	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:71451679 () rs orientation: forward

Symbol	Name	Function Class
1600022D10Rik	RIKEN cDNA 1600022D10 gene	within coordinates