rs33101454 SNP Detail

Summary

• ID
  rs33101454
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:152634846 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CACTGCCTCC AACTAGTCCG GACAAGTCCT GGGTATTTTC AGCCACCTTT ATCTGATTAG
  AAATGTTTGG AATTCCACTG GCTGAAGGCA AGCAATCTGG AGGATTATGC AATGGGTACA
  AATCTCCAGA ATGCCCTTCC CTCTGCTCTT CCCCCTCTGC TACGCATGAA TGCACCCCAC
  CCTCCAAATA TCTGAAACCT TAGAGGTCTT TGTGGGCCAC ATCCACAACC CAGGCTCCTC
  AGCCCTTCAC CGTGCAGAGC TACAGGCTGC AGACACTCAG GGGAGTGCCA CCCAAAGGTG
  Y
  GCTATCCAAG CAACTGATAA TACACATCAT TACCACGAAG TCTAGAACAG CTAACTATCT
  GCTCAGGTAT ATGGACTCCT CAGAAATCTC AGTGTCATAA TGTGTGGCTC AATAGATAGA
  CACTGAAATC CAGGTACTTG CCCAACGACC ACCAGCTATA AGTCAAAGCC TGGTCTTAGG
  CCTCCTGACT CCTGGGGCAA AGACTGCTAA GCCTGATGTT CTAGGGTACA GGAACAGCTG
  CACCCATTCC ACAGGCATGG CAGCAGAATC AAATGGCCCA CAGTATATGC CCAATAAATA
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45237260	mCV27575574	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33101454					SNP	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:152634846 () rs orientation: forward

Symbol	Name	Function Class
Bcl2l1	BCL2-like 1	within coordinates
Rr367333	regulatory region 367333	1515 bp upstream
Rr374092	regulatory region 374092	within coordinates
Rr567472	regulatory region 567472	within coordinates
Rr567473	regulatory region 567473	616 bp proximal
Rr567474	regulatory region 567474	1280 bp proximal
Tssr26859	transcription start site region 26859	341 bp upstream