rs33101716 SNP Detail

Summary

• ID
  rs33101716
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:84414182 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCCTGGTAAG TATCAAAGAC CAGTGAGGCA CAACTCCAGC
  AGGGGGTTAG TCACTTGCTC CTTTCAAACG CATTTATCAA ACATCTATGA CAAGATTCTC
  S
  GTTCTTATTG CTGTGTAACA AACCACTCCT AAACCTAATG GCTTAAAATA ACACGGCTTT
  ATTTGCTTAT GGTTTTATAG GTCAGTAATT TGGGAAGGG                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39494844	mCV24480938	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	G
ss146130459	ENSMUSSNP6408788	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33101716					SNP	C	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:84414182 () rs orientation: forward

Symbol	Name	Function Class
Tssr146028	transcription start site region 146028	1428 bp upstream
Tssr149629	transcription start site region 149629	328 bp upstream