rs33102633 SNP Detail

Summary

• ID
  rs33102633
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:61964220 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGTTC ACACATGCCT GTGAACATAA
  R
  GACATCAACA GAGATGTCTA GTTCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	PWD/PhJ	SM/J	WSB/EiJ
ss45737277	mCV23377794	ABI	CRAMUS_MOUSE	f	SNP		G	A				G
ss61171333	NES16678238	PERLEGEN	MM_PANEL2	f	SNP	G			A	G	A		A	A	G		G	G		A
ss148545824	ENSMUSSNP226200	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A
ss321556037	CHEV_5_62198116	CHEVERUD	SCREENING_POP	f	SNP											A			A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	PWD/PhJ	SM/J	WSB/EiJ
rs33102633					SNP	G	G	A	A	G	A	G	A	A	G	A	G	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61171333	NES16678238	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:61964220 () rs orientation: forward

Symbol	Name	Function Class
G6pd2	glucose-6-phosphate dehydrogenase 2	1966 bp upstream
Gm73520	predicted gene, 73520	within coordinates
Tssr46354	transcription start site region 46354	162 bp downstream
Tssr46355	transcription start site region 46355	141 bp downstream
Tssr46356	transcription start site region 46356	127 bp downstream