rs33103405 SNP Detail

Summary

• ID
  rs33103405
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:83079367 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTAAGCAAAC CTGTAGAGCA
  TTTTCTTAAT GTGTGATTGA TGGAGGAGGC CCCAGCCCAG TGTGAGAGGT GCCACCCATA
  GACTGGTGAA CCATCGACTG TGTTCAATGA GAACACAGGA TGAGCAAGCC ATTAGCAGAC
  CTCTTCTACG GCCTCTACAT CAGTTCCCAC CTTCAGGTTC CTGCCTGGCT TTGAGCTCCT
  R
  CCTTGGTTTC CCTCTGTGGA CTGTGATTCG GGATATGTGA GCCAAAGAAA CCCTTTCCTC
  TAAGAGTTTC TTTTGTTCAT GATGTTTCAT CCCAGAAAAA ATAACCATAA CTAAGACACC
  AAGCAATCTG TTCCCAGACC AAATGAAAGA TTGCTAAGAA TTATGCTATC CTTTAAAAAC
  GTTTCGGCTC CTTTTTGTAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss46235040	mCV24054919	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G
ss322735739	CHEV_8_84876637	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs33103405					SNP	A	A	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:83079367 () rs orientation: forward

Symbol	Name	Function Class
Il15	interleukin 15	within coordinates
Rr382378	regulatory region 382378	1798 bp downstream
Rr400995	regulatory region 400995	1186 bp downstream
Rr666114	regulatory region 666114	1086 bp distal
Rr666115	regulatory region 666115	1293 bp distal
Tssr81943	transcription start site region 81943	670 bp downstream
Tssr81944	transcription start site region 81944	714 bp downstream
Tssr81945	transcription start site region 81945	757 bp downstream
Tssr81946	transcription start site region 81946	812 bp downstream
Tssr81947	transcription start site region 81947	1595 bp downstream