rs33103522 SNP Detail

Summary

• ID
  rs33103522
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:70336537 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CATGA TCTCAGCGCT GGGATCCTGT
  R
  CTTATCCTTA CACCTTAGTG TTAGA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46234754	mCV22674398	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss145115272	ENSMUSSNP3395134	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		A
ss322697612	CHEV_8_72407786	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33103522					SNP	G	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:70336537 () rs orientation: forward

Symbol	Name	Function Class
Cilp2	cartilage intermediate layer protein 2	within coordinates
Cpgi20423	CpG island 20423	382 bp distal
Cpgi20424	CpG island 20424	1481 bp proximal
Cpgi20425	CpG island 20425	1924 bp proximal
Gm33746	predicted gene, 33746	within coordinates
Tssr81538	transcription start site region 81538	1711 bp upstream