rs33104257 SNP Detail

Summary

• ID
  rs33104257
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:52208416 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TATTTTATTT TTTCCTATGC CAATGACTGT GGCTTCAAAT
  CTGCAATTGA GAGATGAGAT GGATGTATTT ACGTGTCTCT TTGTGTGAGC ATTTATGCAC
  R
  TATATGTTTC TGTTTGTTAT AGTGATTTAG CCTTACTTGC AGAATAATAT TTCTGAAGTG
  TTGTTTCAGG TATGGTTAAT TTTTTTTTTA AAAAGGCAC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39494303	mCV25231727	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	A
ss145758500	ENSMUSSNP6764486	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		A
ss325417409	CHEV_17_52040713	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33104257					SNP	G	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:52208416 () rs orientation: forward

Symbol	Name	Function Class
Gm20098	predicted gene, 20098	within coordinates
Rr335418	regulatory region 335418	1585 bp proximal
Rr342130	regulatory region 342130	1617 bp distal
Tssr148689	transcription start site region 148689	1761 bp upstream