rs33104466 SNP Detail

Summary

• ID
  rs33104466
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:9228902 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCTAGAGGG AGCAAACTAT
  GCAGCCATCC CATGTGTGTG GTAGTCACAG ACTTTTAGAG ACTCTGAAGG CATTTCTGCA
  TCACCAGCAA GTGGTGGAAA GATAGGTGGA ACTTACGAAA GACGCCAGCT GAGTTTTGTC
  TCTTGTTGTA CAAGAGGGAG CTGCCTGCAC AAAGCTCAGG CCAGGGTGGT GAACATACAG
  Y
  GCTGGCTGAT CTTACTCATG GGGGTTGGGT ACCAGGGTCT GATGGACTTG TGGTAGGAAT
  AAAAAGAGTG AAGAGTGATG TTAGGGTTTT GTTGGATCAT TTCATTATTT TGGTTGTCAC
  AAAAACATTA AAAAATGTAA GTTATAAGAC ACCTCTGTCA GGATCAAAAT TTGTAACAGA
  TGCTGTGCCT GCTGCCTCCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39494511	mCV22944474	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss145126190	ENSMUSSNP3527389	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33104466					SNP	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:9228902 () rs orientation: forward

Symbol	Name	Function Class
1700010I14Rik	RIKEN cDNA 1700010I14 gene	1751 bp downstream
D17Mit225	DNA Segment, Chr 17, Massachusetts Institute of Technology 225	424 bp proximal
Rr521842	regulatory region 521842	184 bp distal