rs33106374 SNP Detail

Summary

• ID
  rs33106374
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:84823132 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGGCC CCGCAGCCCA GAGAGGGGCA
  W
  ATTGTGAAGG GCCCCGGCCT CCAGC                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss46234676	mCV23392724	ABI	CRAMUS_MOUSE	f	SNP	T	A	A
ss145371884	ENSMUSSNP1209599	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A	A
ss322747564	CHEV_8_86620402	CHEVERUD	SCREENING_POP	f	SNP				A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs33106374					SNP	T	A	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:84823132 () rs orientation: forward

Symbol	Name	Function Class
Dcaf15	DDB1 and CUL4 associated factor 15	569 bp downstream
Gm39210	predicted gene, 39210	1537 bp upstream
Rfx1	regulatory factor X, 1 (influences HLA class II expression)	within coordinates