rs33108096 SNP Detail

Summary

• ID
  rs33108096
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:47445944 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GTACACAATG CATAGTACAC AAAATATCAC ATCTGGAGCT GACAATTAAG CCTCCTCCCT
  GAGTACTATT TTTCATTGTG TCAAATAGGT GCCAAAGAAG CTTCTAGGAG GAAGCAATCA
  ATAGACATGC ACAGATATGT GGCCCTAGAG TTACAATCAC TAAATATAGT GTAGTAGCTC
  TACAAGTGCA ATAATGACAC ACGTATCTTG GAGTTAACCA GCAGTTCTCA AATTGAATTC
  AAGACTTAGA TTGGACTGCT CAAATAGAAA AAAAAAACAG AAAAAAAACC AAAAAAAAAA
  M
  CAAAAACAAC AACAACAACA ACAACAAAAC ATGCCTGGTA ATGGAAACCT ACTGAACTTA
  CAGTGGGCAA GTGAGGTCCA TAGACCTTGG GGAAGAATAT ATAACTGCCT TTAATCAGAC
  AGAATAATTT GAAATTGCAT TCAAAATTAT ATACTCATAG ATAAATAGAT AAGTATTGCC
  CTCACACCTC ATGAAATAAA GTTTTATTTT TCAAAAGATG GAGACCATTG TAGAAAACTA
  CAGCCAAAAA AAAAAATGTA GAGAAAAATA ATCTATGGGA CTTTGACCCT ACTGATACAT
                                                                   
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J
ss45238816	mCV25125655	ABI	CRAMUS_MOUSE	f	SNP	C	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J
rs33108096					SNP	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:47445944 () rs orientation: forward

Symbol	Name	Function Class
D2Ucl22	DNA segment, Chr 2, University College London 22	912 bp proximal