rs33108631 SNP Detail

Summary

• ID
  rs33108631
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:95158999 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGAGTGCT GGGCTTGCCC
  AGCCTTTGTG TGTCCTGGAA ATTCAAAGTT GGGTCCTCTT GTTTGGATGA GTGTCTTATG
  CACCTAGCCA GCTCCTCAAC CTTCTATTTT TCTAAGTGCC TTAAGCTTTA GAACAGTCTG
  ATGTGGAATG GATGGTCACA TGACCTTTCT GCCTCAGGTC CTACAGGGAG CTAGGTTTTA
  S
  TTATTTTTAG ACTACTATTT ATTGTGTGTG TATGAGTACG TATGTGCACC CACGCATGTG
  CAAGGACGTC AGGGAGGGTG TTCTTCCCTC TATCACTTTG CTGGATCCTG GATCTTGCAC
  TGCTTAGACT GGAAGCCCAC CAGCCATCTT CCTGTCAGCT CTGCTTGGAG GCGGAGTATA
  GGCTTCTGTA AAGTGGCATC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss46772576	NES10659963	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	G	C	G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs33108631					SNP	C	C	C	C	C	C	C	C	G	C	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46772576	NES10659963	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:95158999 () rs orientation: forward

Symbol	Name	Function Class
Bnipl	BCL2/adenovirus E1B 19kD interacting protein like	495 bp upstream
Gm64944	predicted gene, 64944	within coordinates
Prune1	prune exopolyphosphatase	1986 bp downstream
Rr580874	regulatory region 580874	276 bp distal
Tssr34455	transcription start site region 34455	570 bp upstream
Tssr34456	transcription start site region 34456	544 bp upstream
Tssr34457	transcription start site region 34457	528 bp upstream