rs33110952 SNP Detail

Summary

• ID
  rs33110952
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:47746326 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TATTT CATGAAATAT ACATTAAGAT
  S
  GGGCTTGGTG GTCTGAGCAT TTAAT                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39495652	mCV25219142	ABI	CRAMUS_MOUSE	f	SNP	G	G	C	C	C
ss145706714	ENSMUSSNP5659427	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	C		C
ss325406105	CHEV_17_47572350	CHEVERUD	SCREENING_POP	f	SNP						C	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33110952					SNP	G	G	C	C	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:47746326 () rs orientation: forward

Symbol	Name	Function Class
AI661453	expressed sequence AI661453	1238 bp upstream
Cimip3	ciliary microtubule inner protein 3	within coordinates
Cpgi9259	CpG island 9259	793 bp proximal
Rr339933	regulatory region 339933	874 bp proximal
Tssr144911	transcription start site region 144911	1184 bp upstream
Tssr144912	transcription start site region 144912	1200 bp upstream
Tssr144913	transcription start site region 144913	1215 bp upstream
Tssr144914	transcription start site region 144914	1246 bp upstream
Tssr144915	transcription start site region 144915	1330 bp upstream
Tssr148435	transcription start site region 148435	1971 bp upstream
Tssr148436	transcription start site region 148436	1945 bp upstream
Tssr148437	transcription start site region 148437	1819 bp downstream
Tssr148438	transcription start site region 148438	1964 bp downstream