rs33112950 SNP Detail

Summary

• ID
  rs33112950
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:70953026 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCCTA ATAGGTGCTG GGTGATGCTC
  S
  CCTCACTCCT GTTTAGTGAG ATCTC                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46236229	mCV22782714	ABI	CRAMUS_MOUSE	f	SNP	G	C	C	G
ss145126671	ENSMUSSNP5743959	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		G
ss322700336	CHEV_8_73024275	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33112950					SNP	G	C	C	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:70953026 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Cpgi20464	CpG island 20464			481 bp proximal
Cpgi20465	CpG island 20465			1915 bp proximal
Crlf1	cytokine receptor-like factor 1			Intron
				Noncoding-Transcript-Variant
Gm63784	predicted gene, 63784			within coordinates
Rr664779	regulatory region 664779			1570 bp proximal
Rr664780	regulatory region 664780			1699 bp proximal
Tssr77746	transcription start site region 77746			1751 bp downstream
Tssr77747	transcription start site region 77747			740 bp upstream