rs33115216 SNP Detail

Summary

• ID
  rs33115216
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:52649769 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        GATGT TAAGATTGAG AGTGATGCTC
  M
  AGAGCCAGCC GAGCCAGAGG ATTAC                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J
ss46236638	mCV23398935	ABI	CRAMUS_MOUSE	f	SNP	C	A
ss144869113	ENSMUSSNP3916788	ENSEMBL	ENSEMBL_Sanger	r	SNP	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J
rs33115216					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:52649769 () rs orientation: reverse

Symbol	Name	Function Class
Gm9892	predicted gene 9892	within coordinates
Gm64848	predicted gene, 64848	266 bp downstream
Rr663484	regulatory region 663484	323 bp proximal
Tssr81291	transcription start site region 81291	132 bp downstream
Tssr81292	transcription start site region 81292	305 bp downstream
Tssr81293	transcription start site region 81293	400 bp downstream
Tssr81294	transcription start site region 81294	414 bp downstream