rs33117217 SNP Detail

Summary

• ID
  rs33117217
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:160608126 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCCACCACA CACAGCCCAC
  ACCAAAAGCA AAGGCTGTCT TTCTATTCCA ATGTTTCCCA GGGTGAAGGA TTTCTACACT
  CCAGCCAGTT GTGGCCCATG CCTGTAACTC AGTGCTTGGG AGGTAGAGGC AGGAAGAGCA
  CCCAAGTCTG AGGCCAGCCT GGTCTACACA GTGAGTCGAC CAGGCAGGTA GGAGGCCAGC
  Y
  AGGGCCACAC ATAGGTCTAT GTGACAGAAT ATGCTATTTC TTAGTTCGCT TTCATAGTTG
  GCCGCAGTAG CAGGTGACCC TCACTTAGCA CCAGGATAGT CGCTTCAGCT GTTCCTGGGA
  GACAGGAAGC ACACCAAAGG CAGACTGTTC AAATCACCCC CAGCCGTACT TCTCAGCAGT
  CGGGCCCCCT GAGAACAAAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45239120	mCV23576572	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	T
ss148150713	ENSMUSSNP2034	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33117217					SNP	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:160608126 () rs orientation: forward

Symbol	Name	Function Class
Plcg1	phospholipase C, gamma 1	Intron
Rr569070	regulatory region 569070	75 bp proximal