rs33118133 SNP Detail

Summary

• ID
  rs33118133
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:40830948 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGGA GCCTGAAAGA GGAGTGAACC
  R
  GTACGAAAGC CTATGGAAAA AGGTA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss39496941	mCV24452201	ABI	CRAMUS_MOUSE	f	SNP		G	A						A
ss62724053	NES17340809	PERLEGEN	MM_PANEL2	f	SNP	G		A	G	A	G	G	G	A	A	G		A		A	A	A		G
ss145609483	ENSMUSSNP2633452	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A						A					G
ss325386003	CHEV_17_40657006	CHEVERUD	SCREENING_POP	f	SNP												G						A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs33118133					SNP	G	G	A	G	A	G	G	G	A	A	G	G	A	G	A	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss62724053	NES17340809	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:40830948 () rs orientation: forward

Symbol	Name	Function Class
Esp8	exocrine gland secreted peptide 8	within coordinates
Gm49847	predicted gene, 49847	100 bp downstream
Rr337560	regulatory region 337560	1208 bp distal
Rr392616	regulatory region 392616	653 bp downstream
Tssr144637	transcription start site region 144637	29 bp downstream
Tssr144638	transcription start site region 144638	13 bp downstream