rs33119996 SNP Detail

Summary

• ID
  rs33119996
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:110340400 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TTACCTTTAT ACACTGTTGG TGGGAGTGTA ACCACGTGTA ACCTGTAGCA AACAATAGGG
  AGGTTCCTAA AAAAACAAAC TACAAGGATG CTATATGACT CTGCTATATG AAGACTAGGT
  GTATACCCAC AGGGAATGAA GTCAGCACTC AGAAGAGAGC CTGTGTGTCC ATATTAATAC
  TCAGTACTGT TAACCATAGC CAAGCTACAG CAGTGGCTCA GGTGCCTGTA AACAGATGAC
  AGATGAATAG ATAAAAAAGA GGATATATAT ATATATATAT ATATATATAT ATATATATAT
  R
  TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TG                              
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss46237687	mCV24836646	ABI	CRAMUS_MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs33119996					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:110340400 () rs orientation: forward

Symbol	Name	Function Class
Gm64800	predicted gene, 64800	within coordinates
Pkd1l3	polycystic kidney disease 1 like 3	428 bp upstream
Rr669717	regulatory region 669717	652 bp proximal
Rr669718	regulatory region 669718	1243 bp proximal
Tssr79361	transcription start site region 79361	460 bp upstream
Tssr79362	transcription start site region 79362	649 bp upstream