rs33122386 SNP Detail

Summary

• ID
  rs33122386
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:181301973 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCGACCCCAA TACCTACATA AACCTGGGTG TCTGCTCTGC
  CACAGTTCTA TCCCTGAGCA GAAAGAGGCA ATGTCCTCAC CCCCCCCAAC CACCCCTCCC
  R
  CCCCAGTCCT TGCCTCATAA TAGGATGTGG AGCCCAAAAA CTTCAAAGAT TATCTTTCTC
  TGTACCTTTC AGACAGACAG ACAAGGGACA AAAAAGGCA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45239999	mCV22775474	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs33122386					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:181301973 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12934	CpG island 12934	425 bp distal
Gm29797	predicted gene, 29797	713 bp downstream
Gm74533	predicted gene, 74533	807 bp upstream
Rr573063	regulatory region 573063	317 bp distal
Rr573064	regulatory region 573064	755 bp distal
Rr573065	regulatory region 573065	438 bp distal