rs33125463 SNP Detail

Summary

• ID
  rs33125463
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:96963254 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACACTAAGAA GAGGGAGTCA
  GATCTCATTA CAGATGGTTG TGAGCCACCA TGTGGTTGCT GGGATTTGAA CTCCCGACCT
  TCGGAAGAGC AGCCGGGTGC TCTTACCCAT TGAGCCATCT CACCAGCCCA TGATACTGCA
  TCTTAAAGTA AGGATCATAA TTAGTTTTTT TTTCAATTTC ACAAAGGCCC AGCTGAAAAG
  Y
  TATCAGACAA ATGCCTGACA GACTCCCTTG GAGCAGCTTG GTAAATGGCC ACTCTGTCCC
  TACATTTCCA AATATAATCT CTTTCAGTGC CGCATGAGGG CACTGTAGCT ATCCCTAAAG
  GGTACATTCT TCCATTCTTG TGATACGTGG CTGATCTTTT CCCTTCACCT AAAAATGCGA
  CTGGGGTTAA AGAGTTTTGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss47759218	NES11273822	PERLEGEN	MM_PANEL2	f	SNP	C	T	C	C	C	C	C	C	C		C	C	C	C		C
ss323115585	CHEV_9_96981620	CHEVERUD	SCREENING_POP	f	SNP										C					T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs33125463					SNP	C	T	C	C	C	C	C	C	C	C	C	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47759218	NES11273822	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:96963254 () rs orientation: forward

Symbol	Name	Function Class
Slc25a36	solute carrier family 25, member 36	within coordinates