rs33127670 SNP Detail

Summary

• ID
  rs33127670
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:192805610 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGCTAAAGTG CAGCTGCAGA
  AAACTGGGAG AGGCAGAAAA GACTGACACC CGCTTGGCCT TCCCACCGGC ACAAACTGAT
  ATTACAGAAA CTCATGTCCA GCTGGCTGCC ATTTGATCAC AGGCATGGTG ACCATGGAGG
  GTGGGGGGGG GGGTGGCTTT GGGGCTCCTC TTAGTAATAA GAACACTCAG ACTGGCCACC
  M
  CTGGGCCTCA CAAACTTGAA AAGGTACTGC TCCAATGAAG AAGGCTGGCA GAGGGGGGAA
  GAACACTCTC TCCCTTCTCT TCTCCCTGTT AGGAGGGCAA AGCCTTGCTC AGACTCCAAG
  TCTAGAGACT TGAGGCCTGG GACTGCCTCC CCACTTCACC CTGCAGCCTC CTCTCCACAC
  TAACTATTGA AAAGCACAAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46774911	NES10640295	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C		C	C	C	C		A
ss320200885	CHEV_1_194949496	CHEVERUD	SCREENING_POP	f	SNP											C					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs33127670					SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46774911	NES10640295	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:192805610 () rs orientation: forward

Symbol	Name	Function Class
Rr367086	regulatory region 367086	236 bp downstream
Utp25	UTP25 small subunit processome component	within coordinates