rs33132703 SNP Detail

Summary

• ID
  rs33132703
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:64978869 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACCT TAATCCCAGT GCTGAGAAGG
  R
  AGGGGAGTTC CTGGTCAGCC AGAGC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45742007	mCV24258351	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss148576870	ENSMUSSNP5600234	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs33132703					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:64978869 () rs orientation: forward

Symbol	Name	Function Class
Gm31684	predicted gene, 31684	1776 bp downstream
Klf3	Kruppel-like transcription factor 3 (basic)	within coordinates
Rr612115	regulatory region 612115	1650 bp distal
Tssr46420	transcription start site region 46420	567 bp downstream
Tssr46421	transcription start site region 46421	389 bp upstream
Tssr46422	transcription start site region 46422	552 bp upstream
Tssr46423	transcription start site region 46423	591 bp upstream
Tssr46424	transcription start site region 46424	694 bp upstream
Tssr46425	transcription start site region 46425	1458 bp upstream